Reconstruction of network structures from repeating spike patterns in simulated bursting dynamics.

Repeating patterns of spike sequences from a neuronal network have been proposed to be useful in the reconstruction of the network topology. Reverberations in a physiologically realistic model with various physical connection topologies (from random to scale free) have been simulated to study the effectiveness of the pattern-matching method in the reconstruction of network topology from network dynamics. Simulation results show that functional networks reconstructed from repeating spike patterns can be quite different from the original physical networks; even global properties, such as the degree distribution, cannot always be recovered. However, the pattern-matching method can be effective in identifying hubs in the network. Since the form of reverberations is quite different for networks with and without hubs, the form of reverberations together with the reconstruction by repeating spike patterns might provide a reliable method to detect hubs in neuronal cultures.